Package: longevity 1.3

longevity: Statistical Methods for the Analysis of Excess Lifetimes

A collection of parametric and nonparametric methods for the analysis of survival data. Parametric families implemented include Gompertz-Makeham, exponential and generalized Pareto models and extended models. The package includes an implementation of the nonparametric maximum likelihood estimator for arbitrary truncation and censoring pattern based on Turnbull (1976) <doi:10.1111/j.2517-6161.1976.tb01597.x>, along with graphical goodness-of-fit diagnostics. Parametric models for positive random variables and peaks over threshold models based on extreme value theory are described in Rootzén and Zholud (2017) <doi:10.1007/s10687-017-0305-5>; Belzile et al. (2021) <doi:10.1098/rsos.202097> and Belzile et al. (2022) <doi:10.1146/annurev-statistics-040120-025426>.

Authors:Leo Belzile [aut, cre], Mitchell O'Hara-Wild [ctb]

longevity_1.3.tar.gz
longevity_1.3.zip(r-4.7)longevity_1.3.zip(r-4.6)longevity_1.3.zip(r-4.5)
longevity_1.3.tgz(r-4.6-x86_64)longevity_1.3.tgz(r-4.6-arm64)longevity_1.3.tgz(r-4.5-x86_64)longevity_1.3.tgz(r-4.5-arm64)
longevity_1.3.tar.gz(r-4.7-arm64)longevity_1.3.tar.gz(r-4.7-x86_64)longevity_1.3.tar.gz(r-4.6-arm64)longevity_1.3.tar.gz(r-4.6-x86_64)
longevity_1.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
longevity/json (API)
NEWS

# Install 'longevity' in R:
install.packages('longevity', repos = c('https://lbelzile.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/lbelzile/longevity/issues

Pkgdown/docs site:https://lbelzile.github.io

Uses libs:
  • c++– GNU Standard C++ Library v3
Datasets:

On CRAN:

Conda:

extremessurvival-analysiscpp

4.93 score 17 scripts 124 downloads 87 exports 13 dependencies

Last updated from:30e9b9be17. Checks:13 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK162
linux-devel-x86_64OK158
source / vignettesOK195
linux-release-arm64OK169
linux-release-x86_64OK155
macos-release-arm64OK125
macos-release-x86_64OK266
macos-oldrel-arm64OK111
macos-oldrel-x86_64OK223
windows-develOK142
windows-releaseOK132
windows-oldrelOK147
wasm-releaseOK120

Exports:.censTruncLimits.censTruncLimitsDtrunc.check_surv.turnbull_intervalsautoplot.elife_northropcolemanautoplot.elife_parautoplot.elife_profileautoplot.elife_tstabautoplot.elife_tstab_endpointboxcox_transfocheck_argumentscheck_elife_distdbearddbeardmakedelifedextgpdextweibulldgompdgompmakedgpddgppiecedperksdperksmakeendpoint.profileendpoint.tstabfit_ditrunc_elifefit_elifehazard_elifehazard_fn_elifehbeardhbeardmakehelifehexphextgphextweibullhgomphgompmakehgpdhperkshperksmakehweibulllpost_elifenc_score_testnc_testnll_ditrunc_elifenll_elifenp_elifenpsurvpbeardpbeardmakepelifepextgppextweibullpgomppgompmakepgpdpgppiecepperkspperksmakeprof_exp_scaleprof_gp_endptprof_gp_scaletprof_gp_shapeqbeardqbeardmakeqelifeqextgpqextweibullqgompqgompmakeqgpdqgppieceqperksqperksmaker_ditrunc_elifer_dtrunc_elifer_ltrc_eliferbeardrelifergppiecesamp_elifesamp2_elifeselifetest_ditrunc_elifetest_elifetstabturnbull_intervals

Dependencies:codetoolsdigestfuturefuture.applyglobalslistenvnumDerivparallellyRcppRcppArmadillorlangRsolnptruncnorm

Introducing longevity

Léo Belzile

Rendered fromintroduction.Rmdusingknitr::rmarkdownon Jun 03 2026.

Last update: 2024-07-06
Started: 2023-09-11

Nonparametric maximum likelihood estimation for survival data

Léo Belzile

Rendered fromnonparametric.Rmdusingknitr::rmarkdownon Jun 03 2026.

Last update: 2023-09-11
Started: 2023-09-08